STRINGSTRING
slr0042 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0042" - Hypothetical protein in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
slr0042Hypothetical protein (576 aa)    
Predicted Functional Partners:
cmpB
Unknown protein; Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (By similarity) (280 aa)
         
  0.835
cmpA
Bicarbonate transporter; Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Binds bicarbonate with high affinity (By similarity) (452 aa)
         
  0.789
cmpD
Nitrate transport protein subunit NrtD; Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Responsible for energy coupling to the transport system (By similarity) (282 aa)
         
  0.766
cmpC
Nitrate transport protein subunit NrtC; Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Responsible for energy coupling to the transport system (By similarity) (667 aa)
         
  0.764
slr1160
Hypothetical protein (204 aa)
   
     
  0.755
sll1424
Hypothetical protein (491 aa)
   
          0.733
slr0250
Hypothetical protein (178 aa)
   
          0.691
slr1946
Hypothetical protein (261 aa)
   
          0.686
sll1473
Chromatic acclimation sensor CcaS/ScaS/Hik32 (753 aa)
   
          0.681
slr1302
Hypothetical protein (409 aa)
   
     
  0.663
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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