STRINGSTRING
panB protein (Synechocystis sp. PCC6803) - STRING interaction network
"panB" - Alpha-ketopantoate hydroxymethyl transferase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panBAlpha-ketopantoate hydroxymethyl transferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (260 aa)    
Predicted Functional Partners:
panC/cmk
Bifunctional pantothenate synthetase/cytidylate kinase (513 aa)
 
 
  0.984
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine (305 aa)
       
  0.962
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (145 aa)
 
   
  0.937
ilvD
Dihydroxyacid dehydratase (561 aa)
     
 
  0.925
chlM
Mg-protoporphyrin IX methyl transferase; Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor (230 aa)
              0.862
ilvC
Ketol-acid reductoisomerase (331 aa)
       
  0.796
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate (264 aa)
         
  0.682
hisI
phosphoribosyl-ATP pyrophosphohydrolase (215 aa)
           
  0.674
nadE
NH(3)-dependent NAD(+) synthetase; Can use both glutamine or ammonia as a nitrogen source (558 aa)
         
  0.650
SYNGTS_1584
polyA polymerase (942 aa)
   
   
  0.640
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (12%) [HD]