STRINGSTRING
slr0529 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0529" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0529Hypothetical protein (421 aa)    
Predicted Functional Partners:
slr0531
Membrane bound sugar transport protein (298 aa)
 
 
  0.999
slr0530
Membrane bound sugar transport protein (279 aa)
 
 
  0.999
ggtA
ATP-binding subunit of an ABC-type osmolyte transporter (363 aa)
   
 
  0.987
malK
Cytoplasmic membrane protein for maltose uptake (408 aa)
   
 
  0.975
sll0162
Hypothetical protein (194 aa)
           
  0.890
sll0914
Hypothetical protein (376 aa)
           
  0.830
lacF
Lactose transport system permease protein LacF (298 aa)
   
 
  0.800
lacG
Lactose transport system permease protein LacG (270 aa)
   
 
  0.798
sll1878
ABC transporter (368 aa)
       
  0.771
sll0528
Hypothetical protein (379 aa)
         
  0.754
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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