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slt protein (Synechocystis sp. PCC6803) - STRING interaction network
"slt" - Soluble lytic transglycosylase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sltSoluble lytic transglycosylase (813 aa)    
Predicted Functional Partners:
SYNGTS_1530
D-alanyl-D-alanine carboxypeptidase (314 aa)
   
   
  0.754
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3’ to 5’ and 5’ to 3’ exonuclease activity (986 aa)
     
 
  0.695
ftsW
Rod-shape-determining protein; Essential cell division protein. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (By similarity) (393 aa)
 
 
 
  0.607
sll1369
Hypothetical protein (430 aa)
   
   
    0.549
slr0211
Hypothetical protein (403 aa)
   
          0.547
slr0533
Sensory transduction histidine kinase Hik10 (372 aa)
   
   
  0.538
sll1350
Hypothetical protein (398 aa)
   
          0.535
slr0250
Hypothetical protein (178 aa)
 
        0.532
murJ
Hypothetical protein; Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (By similarity) (533 aa)
 
     
  0.517
SYNGTS_2406
Penicillin-binding protein 4 (486 aa)
         
  0.512
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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