STRINGSTRING
slr0544 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0544" - ABC transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0544ABC transporter (266 aa)    
Predicted Functional Partners:
slr0594
Hypothetical protein (407 aa)
  0.994
hlyD
Hemolysin secretion protein (583 aa)
 
  0.915
sll1481
ABC-transporter DevB homolog (451 aa)
   
  0.902
slr0793
Hypothetical protein (215 aa)
   
  0.902
sll0180
Hypothetical protein (501 aa)
   
  0.902
sll1053
Hypothetical protein (520 aa)
   
  0.902
slr1270
Hypothetical protein (526 aa)
   
  0.756
slr1735
ABC transporter (252 aa)
         
0.627
SYNGTS_2378
Phosphate-binding periplasmic protein precursor (383 aa)
       
  0.508
sll0484
ABC transporter (245 aa)
 
   
0.494
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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