STRINGSTRING
slr1421 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1421" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1421Hypothetical protein (107 aa)    
Predicted Functional Partners:
slr2119
Hypothetical protein (278 aa)
   
          0.776
slr0179
Hypothetical protein (357 aa)
   
          0.635
sll0482
Hypothetical protein (407 aa)
   
          0.633
sll1913
Hypothetical protein (599 aa)
   
          0.618
sll1527
Hypothetical protein (1168 aa)
   
          0.582
sll1355
Hypothetical protein (181 aa)
   
          0.549
slr1245
Transcriptional regulator (302 aa)
   
          0.522
sll1560
Transposase (338 aa)
   
          0.517
sll1255
Transposase (338 aa)
   
          0.511
slr0180
Transposase (338 aa)
   
          0.509
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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