STRINGSTRING
lim17 protein (Synechocystis sp. PCC6803) - STRING interaction network
"lim17" - LIM17 protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lim17LIM17 protein (489 aa)    
Predicted Functional Partners:
cscK
Fructokinase (307 aa)
   
 
    0.777
ndhN
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (By similarity) (161 aa)
   
          0.774
slr0923
Hypothetical protein; Probably a ribosomal protein or a ribosome-associated protein (112 aa)
   
          0.754
ycf23
Hypothetical protein (248 aa)
   
          0.738
slr0022
Hypothetical protein (123 aa)
   
          0.737
sll0031
Hypothetical protein (395 aa)
   
          0.733
slr1599
Hypothetical protein (188 aa)
   
        0.731
ssr3188
Hypothetical protein (89 aa)
   
          0.731
ssl0352
Hypothetical protein (58 aa)
   
        0.705
sll1934
Hypothetical protein (148 aa)
   
          0.677
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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