STRINGSTRING
ddh protein (Synechocystis sp. PCC6803) - STRING interaction network
"ddh" - 2-hydroxyaciddehydrogenase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddh2-hydroxyaciddehydrogenase (333 aa)    
Predicted Functional Partners:
pyk2
Pyruvate kinase (591 aa)
   
 
  0.987
pyk1
Pyruvate kinase (483 aa)
   
 
  0.979
gloB
Glyoxalase II; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (257 aa)
   
 
    0.966
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate (818 aa)
   
 
  0.964
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1199 aa)
       
  0.946
slr1840
Hypothetical protein (371 aa)
   
 
  0.916
me
Malic enzyme (463 aa)
     
 
  0.908
pdhA
Pyruvate dehydrogenase E1 component, alphasubunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (342 aa)
   
 
    0.901
pdhB
Pyruvate dehydrogenase E1 beta subunit (324 aa)
   
 
    0.901
ilvB
Acetolactate synthase (550 aa)
   
 
  0.850
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (10%) [HD]