STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1491Beta transducin-like protein; ORF_ID:sll1491. (348 aa)    
Predicted Functional Partners:
slr1409
Beta transducin-like protein; ORF_ID:slr1409.
 
    
0.921
slr0599
Eukaryotic protein kinase; ORF_ID:slr0599; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
 
    0.866
slr1041
PatA subfamily; ORF_ID:slr1041.
      
 0.781
pknA
Protein kinase; ORF_ID:slr1225; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
 
    0.781
cbaB
3-chlorobenzoate-3,4-dioxygenase; ORF_ID:sll1869.
      
 0.780
pknA-3
Eukariotic protein kinase; Protein kinase required for cell motility, but not for phototaxis.
    0.730
slr1019
Uncharacterized isomerase slr1019; ORF_ID:slr1019; hypothetical protein; Belongs to the PhzF family.
    
 
 0.707
sll0482
ORF_ID:sll0482; hypothetical protein.
      
 0.689
sll0992
Esterase; Serine hydrolase involved in the detoxification of formaldehyde.
      
 0.683
sll1773
Putative quercetin 2,3-dioxygenase sll1773; Putative quercetin 2,3-dioxygenase; Belongs to the pirin family.
      
 0.682
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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