STRINGSTRING
slr1568 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1568" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1568Hypothetical protein (136 aa)    
Predicted Functional Partners:
ssl1498
Hypothetical protein (61 aa)
   
          0.778
slr0038
Hypothetical protein (132 aa)
   
          0.776
sll0846
Hypothetical protein (102 aa)
   
          0.776
slr0975
Hypothetical protein (285 aa)
   
          0.770
cpcE
Phycocyanin alpha phycocyanobilin lyase CpcE; Required for the chromophorylation of the CpcA gene product (272 aa)
   
          0.764
cpcD
Phycocyanin associated linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (83 aa)
   
          0.763
slr0264
Hypothetical protein (369 aa)
   
          0.762
ssl0788
Hypothetical protein (97 aa)
   
          0.759
psaK1
Photosystem I subunit X (86 aa)
   
          0.758
ssl1807
Hypothetical protein (96 aa)
   
          0.757
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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