STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1483Transforming growth factor induced protein; ORF_ID:sll1483. (180 aa)    
Predicted Functional Partners:
slr0880
Secreted protein MPB70 precursor; ORF_ID:slr0880.
      
 0.979
sll0157
ORF_ID:sll0157; unknown protein.
   
  
 0.890
ndhH
NADH dehydrogenase subunit 7; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 49 kDa subunit family.
    
 
 0.842
sll0846
ORF_ID:sll0846; unknown protein.
      
 0.780
ssr2194
ORF_ID:ssr2194; unknown protein.
      
 0.780
sll1236
ORF_ID:sll1236; unknown protein.
      
 0.780
slr1704
ORF_ID:slr1704; unknown protein.
      
 0.680
slr0581
ORF_ID:slr0581; hypothetical protein.
      
 0.680
spoU
rRNA methylase; ORF_ID:slr1673; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
      
 0.676
sll1723
ORF_ID:sll1723; hypothetical protein.
      
 0.675
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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