STRINGSTRING
sll1481 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1481" - ABC-transporter DevB homolog in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1481ABC-transporter DevB homolog (451 aa)    
Predicted Functional Partners:
slr0594
Hypothetical protein (407 aa)
   
  0.972
sll1482
ABC-transporter DevC homolog (383 aa)
 
          0.957
sll0484
ABC transporter (245 aa)
 
  0.953
slr0544
ABC transporter (266 aa)
   
  0.902
slr1270
Hypothetical protein (526 aa)
   
  0.799
sll0778
ABC transporter (790 aa)
         
  0.667
hisI
phosphoribosyl-ATP pyrophosphohydrolase (215 aa)
       
    0.655
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate (254 aa)
              0.586
sll0639
Hypothetical protein (417 aa)
 
          0.566
slr1276
Hypothetical protein (275 aa)
   
          0.561
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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