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degT protein (Synechocystis sp. PCC6803) - STRING interaction network
"degT" - Pleiotropic regulatory protein DegT in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degTPleiotropic regulatory protein DegT (385 aa)    
Predicted Functional Partners:
slr0338
Hypothetical protein (364 aa)
 
 
  0.943
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
 
  0.903
bvdR
Biliverdin reductase (328 aa)
 
 
  0.858
sll0816
Hypothetical protein (371 aa)
 
 
  0.851
SYNGTS_1536
dTDP-glucose 4-6-dehydratase (309 aa)
   
 
  0.831
SYNGTS_2556
dTDP-glucose 4,6-dehydratase (342 aa)
   
 
  0.815
yefA
GDP-D-mannose dehydratase (320 aa)
       
  0.814
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (362 aa)
       
  0.814
rfbG
CDP-glucose-4,6-dehydratase (360 aa)
   
 
  0.806
sll0576
Putative sugar-nucleotide epimerase/dehydratase (312 aa)
 
 
  0.803
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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