STRINGSTRING
slr0460 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0460" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0460Transposase (157 aa)    
Predicted Functional Partners:
slr2036
Transposase (338 aa)
   
          0.617
slr0180
Transposase (338 aa)
   
          0.615
SYNGTS_1873
No annotation available (338 aa)
   
          0.615
sll1560
Transposase (338 aa)
   
          0.615
sll1255
Transposase (338 aa)
   
          0.615
sll1715
Hypothetical protein (157 aa)
   
          0.551
sll1999
Transposase (172 aa)
   
          0.547
sll0236
Hypothetical protein (558 aa)
   
          0.511
sll0676
Hypothetical protein (180 aa)
   
          0.505
sll0317
Transposase (132 aa)
   
          0.503
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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