STRINGSTRING
slr0598 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0598" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0598Hypothetical protein (102 aa)    
Predicted Functional Partners:
slr0948
Hypothetical protein (215 aa)
   
          0.777
slr1780
Hypothetical protein (133 aa)
   
        0.772
slr1918
Hypothetical protein (228 aa)
   
          0.764
slr1796
Hypothetical protein (201 aa)
   
          0.761
sll0564
Hypothetical protein (327 aa)
 
        0.757
ycf36
Hypothetical protein (173 aa)
   
          0.752
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis (240 aa)
   
        0.750
psaF
Photosystem I subunit III; Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI (165 aa)
   
        0.749
slr1195
Hypothetical protein (154 aa)
   
          0.748
spkC
Serine/threonine kinase (535 aa)
              0.741
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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