STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0599Eukaryotic protein kinase; ORF_ID:slr0599; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (535 aa)    
Predicted Functional Partners:
sll0778
ABC transporter; ORF_ID:sll0778.
 
 
 0.887
sll1491
Beta transducin-like protein; ORF_ID:sll1491.
 
    0.866
sll1033
ORF_ID:sll1033; unknown protein.
 
 
 0.865
sll1771
ORF_ID:sll1771; hypothetical protein.
 
 
 0.853
sll0602
ORF_ID:sll0602; unknown protein.
 
 
 0.838
mom72
Mitochondrial outer membrane 72K protein; ORF_ID:sll1667.
 
 
    0.837
sll0777
ORF_ID:sll0777; unknown protein.
      
 0.781
sll0775
ORF_ID:sll0775; unknown protein.
      
 0.781
sll1251
ORF_ID:sll1251; unknown protein.
 
 
    0.691
slr0598
ORF_ID:slr0598; unknown protein.
       0.661
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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