STRINGSTRING
slr0606 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0606" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0606Hypothetical protein (317 aa)    
Predicted Functional Partners:
slr1515
Hypothetical protein (474 aa)
   
  0.807
sll1528
Hypothetical protein (996 aa)
   
   
  0.752
slr0211
Hypothetical protein (403 aa)
   
          0.734
ndhN
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration (By similarity) (161 aa)
   
        0.733
slr1097
Hypothetical protein (163 aa)
   
        0.716
sll0984
Hypothetical protein (148 aa)
   
          0.713
sll0162
Hypothetical protein (194 aa)
   
          0.682
slr1918
Hypothetical protein (228 aa)
   
          0.677
slr1288
Hypothetical protein (194 aa)
   
        0.664
sll1769
Hypothetical protein (105 aa)
   
          0.663
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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