STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0858ORF_ID:sll0858; unknown protein. (197 aa)    
Predicted Functional Partners:
rpoE-2
RNA polymerase sigma-E factor; ORF_ID:sll0856; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.881
sll0857
ORF_ID:sll0857; unknown protein.
       0.773
slr0756
Circadian clock protein KaiA; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of KaiC. In contrast, the presence of KaiB in the complex decreases the phosphorylation status of KaiC, suggesting that KaiB acts by antagonizing the interaction between KaiA and KaiC. A KaiA dimer is sufficient to enhance KaiC he [...]
  
     0.654
ssr2806
ORF_ID:ssr2806; unknown protein.
  
     0.590
sll1832
ORF_ID:sll1832; unknown protein.
  
     0.530
sll2013
ORF_ID:sll2013; hypothetical protein.
  
     0.494
slr0270
ORF_ID:slr0270; unknown protein.
  
     0.491
slr1800
ORF_ID:slr1800; unknown protein.
  
     0.477
sll0855
ORF_ID:sll0855; hypothetical protein.
       0.468
sll0854
ORF_ID:sll0854; unknown protein.
       0.467
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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