STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0665Transposase; ORF_ID:sll0665. (114 aa)    
Predicted Functional Partners:
sll0666
Transposase; ORF_ID:sll0666.
     0.898
sll1792
Transposase; ORF_ID:sll1792.
 
     0.832
slr0800
Transposase; ORF_ID:slr0800.
 
     0.789
slr1246
Transposase; ORF_ID:slr1246.
 
     0.733
ssl1922
Transposase; ORF_ID:ssl1922.
  
     0.703
ssr2227
Transposase; ORF_ID:ssr2227.
  
     0.525
sll0667
Transposase; ORF_ID:sll0667.
       0.503
sll0668
Transposase; ORF_ID:sll0668.
       0.494
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.