STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW57361.1AraC-type DNA-binding protein. (282 aa)    
Predicted Functional Partners:
SFW21340.1
Helix-turn-helix domain-containing protein.
  
     0.754
SFW20755.1
AraC-type DNA-binding protein.
  
     0.753
SFW76331.1
AraC-type DNA-binding protein.
  
  
  0.713
SFW76183.1
AraC-type DNA-binding protein.
  
     0.659
SFW74662.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
  
   0.657
SFW65704.1
AraC-type DNA-binding protein.
  
     0.642
SFW71437.1
Helix-turn-helix domain-containing protein.
  
     0.634
SFW37902.1
PAS domain S-box-containing protein.
  
     0.583
SFW24226.1
AraC-type DNA-binding protein.
  
     0.556
SFW47478.1
AraC-type DNA-binding protein.
  
     0.545
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.