STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW59025.1Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (435 aa)    
Predicted Functional Partners:
SFW33932.1
Glutamate synthase (ferredoxin).
  
 0.999
SFW60817.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.943
SFW46914.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.885
SFW33920.1
Glutamate synthase (NADPH/NADH) small chain.
  
 0.835
SFW63065.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.790
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 0.784
SFW59595.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
 
 0.773
SFW61830.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.763
SFW42168.1
2-oxoglutarate dehydrogenase E1 component.
   
 0.760
SFW30591.1
Carbon-nitrogen hydrolase.
   
 
 0.756
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.