STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhhJ-2Inner membrane transport permease YhhJ,putative. (178 aa)    
Predicted Functional Partners:
yhhJ
Inner membrane transport permease YhhJ,putative.
     0.994
CCG07222.1
ABC transporter, ATP-binding protein.
  
 0.979
CCG07223.1
HlyD family secretion protein.
 
  
 0.945
CCG07224.1
RND efflux system, outer membrane lipoprotein,NodT.
     
 0.653
CCG06711.1
Nitroreductase family proteins.
  
  
 0.557
CCG08131.1
Cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.557
CCG08827.1
HlyD family secretion protein.
 
  
 0.525
CCG07225.1
Cyclic nucleotide-binding domain (CNMP-BD) protein.
  
    0.460
CCG07777.1
ABC transporter component.
 
  
 0.436
CCG08828.1
ABC transporter, ATP-binding protein, putative.
 
  
 0.421
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.