STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG09461.1Tetratricopeptide TPR_2 repeat protein. (586 aa)    
Predicted Functional Partners:
CCG09459.1
Unnamed protein product.
       0.773
CCG09460.1
Unnamed protein product.
       0.773
CCG09462.1
Unnamed protein product.
       0.773
CCG06955.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.545
CCG08951.1
Putative uncharacterized protein.
 
   
 0.496
CCG08633.1
TPR repeat.
 
   
 0.494
CCG07120.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.471
CCG09466.1
Binding-protein-dependent transport systems inner membrane component.
  
    0.430
CCG09463.1
Spermidine/putrescine-binding periplasmic protein.
  
    0.421
potG
ABC transporter, nucleotide binding/ATPase protein; Belongs to the ABC transporter superfamily.
  
    0.421
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.