STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000745455_00982Unannotated protein. (890 aa)    
Predicted Functional Partners:
GCA_000745455_00981
Unannotated protein.
 
 0.993
GCA_000745455_01215
Unannotated protein.
  
 0.957
GCA_000745455_01406
Unannotated protein.
  
 0.956
GCA_000745455_00390
Unannotated protein.
 
 
0.674
GCA_000745455_00309
Unannotated protein.
    
 0.633
GCA_000745455_00777
Unannotated protein.
  
 
 0.544
GCA_000745455_01445
Unannotated protein.
     
 0.534
GCA_000745455_01084
Unannotated protein.
     
 0.479
GCA_000745455_01438
Unannotated protein.
    
  0.474
GCA_000745455_00983
Unannotated protein.
       0.473
Your Current Organism:
Mesoaciditoga lauensis
NCBI taxonomy Id: 1150474
Other names: M. lauensis cd-1655R = DSM 25116, Mesoaciditoga lauensis DSM 25116, Mesoaciditoga lauensis DSM 25116 = cd-1655R, Mesoaciditoga lauensis cd-1655R, Mesoaciditoga lauensis cd-1655R = DSM 25116, Thermotogales bacterium cd-1655R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.