STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48147.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
AKA49172.1
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.652
AKA49173.1
3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.609
AKA49657.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.572
AKA48146.1
2-methylthioadenine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.541
AKA47838.1
Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.491
AKA49501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.491
AKA49346.1
TenA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.419
AKA49015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.409
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.