STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48373.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)    
Predicted Functional Partners:
AKA49013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.836
AKA49375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.817
AKA48012.1
2,4-dienoyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA48233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA48335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA48594.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA48597.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA48652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA49148.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
AKA49161.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.812
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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