STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_03707Unannotated protein. (337 aa)    
Predicted Functional Partners:
GCA_000373625_03706
Unannotated protein.
 
     0.974
GCA_000373625_03705
Unannotated protein.
 
     0.951
GCA_000373625_03792
Unannotated protein.
  
     0.599
GCA_000373625_05073
Unannotated protein.
       0.493
GCA_000373625_03704
Unannotated protein.
       0.486
GCA_000373625_06111
Unannotated protein.
  
     0.478
GCA_000373625_04590
Unannotated protein.
  
     0.441
GCA_000373625_05410
Unannotated protein.
    
  0.441
GCA_000373625_05074
Unannotated protein.
       0.420
GCA_000373625_00719
Unannotated protein.
  
     0.405
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.