STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBT_0997Bipolar DNA helicase HerA. (581 aa)    
Predicted Functional Partners:
DBT_0998
Hypothetical protein.
 
     0.946
DBT_0996
Type I restriction-modification system, restriction subunit R.
 
     0.811
DBT_1001
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
     0.807
DBT_0999
Type I restriction-modification system, specificity subunit S.
       0.783
DBT_1000
ATP-dependent DNA helicase.
       0.780
DBT_0429
Hypothetical protein.
 
     0.747
DBT_1002
Hypothetical protein.
       0.561
DBT_0995
ATP-dependent DNA helicase RecG-related protein.
       0.549
DBT_0994
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.455
DBT_1003
Hypothetical protein.
       0.403
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.