STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mviMUnannotated protein. (308 aa)    
Predicted Functional Partners:
wecE
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.982
MFUM_680010
Unannotated protein.
      0.978
lpxB
Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.933
MFUM_970061
Unannotated protein.
   
 
 0.916
MFUM_940076
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.848
wecE-2
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.815
MFUM_570007
Unannotated protein.
    
  0.801
MFUM_700022
Unannotated protein.
    
  0.766
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.753
rmlB
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.747
Your Current Organism:
Methylacidiphilum fumariolicum
NCBI taxonomy Id: 1156937
Other names: M. fumariolicum SolV, Methylacidiphilum fumariolicum SolV, Methylacidiphilum fumariolicum str. SolV, Methylacidiphilum fumariolicum strain SolV
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.