STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ65297.1Hypothetical protein. (816 aa)    
Predicted Functional Partners:
SJZ41627.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.961
SJZ50692.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.926
SKA13650.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.898
SJZ65284.1
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
       0.800
SKA24356.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.794
SKA22302.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
   
    0.787
SKA22994.1
Hypothetical protein.
   
    0.787
SJZ65268.1
Hypothetical protein.
       0.773
SJZ99816.1
Acyl dehydratase.
  
 
 0.762
SKA02336.1
4Fe-4S dicluster domain-containing protein.
     
 0.725
Your Current Organism:
Geobacter thiogenes
NCBI taxonomy Id: 115783
Other names: ATCC BAA-34, G. thiogenes, Geobacter thiogenes (De Wever et al. 2001) Nevin et al. 2007, JCM 14045, Trichlorobacter thiogenes, Trichlorobacter thiogenes De Wever et al. 2001, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.