STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_4649Ester cyclase. (133 aa)    
Predicted Functional Partners:
UV8b_3614
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.762
UV8b_6937
Uncharacterized protein.
      
 0.613
UV8b_7087
Uncharacterized protein.
      
 0.613
UV8b_5686
Putative splicing factor 3a subunit 2.
      
 0.613
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
      
 0.613
UV8b_1980
WD repeat-containing protein 79.
      
 0.613
UV8b_2062
DNA-directed RNA polymerases II 24 kDa polypeptide.
    
  0.585
UV8b_2228
RNA polymerase II subunit 3.
    
  0.560
UV8b_7157
Cytochrome b2.
   
 
 0.552
UV8b_2317
Mitochondrial cytochrome b2.
   
 
 0.552
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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