STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3338Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1183 aa)    
Predicted Functional Partners:
UV8b_6081
Werner syndrome helicase.
    
 0.974
UV8b_5570
Putative PWI domain mRNA processing protein.
    
 0.942
UV8b_1156
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
    
 0.934
UV8b_7448
Putative PHD finger domain protein.
    
 0.916
UV8b_2398
Enhancer of polycomb-like protein.
    
 0.910
UV8b_1309
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.903
UV8b_7535
Histone H3; Belongs to the histone H3 family.
    
 0.898
UV8b_8231
SWR1-complex protein 4.
   
 0.889
UV8b_6064
Putative histone acetyltransferase subunit (Yaf9).
    
 0.878
UV8b_665
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.877
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.