STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_738C6 transcription factor. (877 aa)    
Predicted Functional Partners:
UV8b_6422
GTP-binding protein ypt3.
   
  0.702
UV8b_7369
Rho3 protein.
   
  0.665
UV8b_7194
Rho2 GTPase.
   
  0.665
UV8b_8301
WD40 repeat-like-containing domain.
   
  0.665
UV8b_6169
Small GTPase-binding protein.
   
  0.665
UV8b_5207
Transforming protein rho.
   
  0.665
UV8b_3478
Rho type ras-like GTPase.
   
  0.665
UV8b_1615
RacA.
   
  0.665
UV8b_428
Cell division control protein.
   
  0.665
UV8b_771
Protein rho1.
   
  0.665
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.