STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412185_02067Unannotated protein. (197 aa)    
Predicted Functional Partners:
GCA_000412185_02055
Unannotated protein.
  
     0.651
GCA_000412185_02066
Unannotated protein.
 
     0.550
GCA_000412185_02061
Unannotated protein.
  
     0.491
GCA_000412185_02068
Unannotated protein.
       0.479
GCA_000412185_02069
Unannotated protein.
       0.479
GCA_000412185_00046
Unannotated protein.
 
   
 0.456
GCA_000412185_00109
Unannotated protein.
  
     0.451
GCA_000412185_00047
Unannotated protein.
  
     0.413
Your Current Organism:
Euryhalocaulis caribicus
NCBI taxonomy Id: 1161401
Other names: CGMCC 1.12036, E. caribicus, JCM 18163, Maricaulis sp. JL2009, strain JL2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.