STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412185_02868Unannotated protein. (446 aa)    
Predicted Functional Partners:
GCA_000412185_02867
Unannotated protein.
 0.996
GCA_000412185_03231
Unannotated protein.
  
 0.982
GCA_000412185_00155
Unannotated protein.
  
 0.981
GCA_000412185_00240
Unannotated protein.
  
 0.981
GCA_000412185_01551
Unannotated protein.
    
 0.969
GCA_000412185_00307
Unannotated protein.
  
 0.960
GCA_000412185_01709
Unannotated protein.
   
 0.900
GCA_000412185_00282
Unannotated protein.
  
 0.898
GCA_000412185_00962
Unannotated protein.
   
 0.810
GCA_000412185_01204
Unannotated protein.
    
 0.793
Your Current Organism:
Euryhalocaulis caribicus
NCBI taxonomy Id: 1161401
Other names: CGMCC 1.12036, E. caribicus, JCM 18163, Maricaulis sp. JL2009, strain JL2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.