STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsSPutative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (321 aa)    
Predicted Functional Partners:
LFE_2206
Galactose-1-phosphate uridylyltransferase.
  
 0.994
galU
UTP-glucose-1-phosphate uridylyltransferase.
  
 0.943
LFE_1041
Putative UDP-glucose 6-dehydrogenase.
  
 
 0.933
LFE_1704
Putative NAD-dependent epimerase/dehydratase.
 
0.928
LFE_2244
UDP-galactopyranose mutase.
    
 0.928
LFE_2227
Putative UDP-glucose 4-epimerase.
 
0.919
LFE_1648
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.565
LFE_1394
Putative undecaprenylphosphate galactose phosphotransferase.
 
   
 0.556
LFE_0027
Methyl-accepting chemotaxis sensory transducer.
    
 
 0.549
LFE_2088
Putative SAM-dependent methyltransferase.
  
  
 0.547
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.