STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFE_1740ThiF family protein. (268 aa)    
Predicted Functional Partners:
LFE_0473
Putative molybdopterin (MPT) converting factor, subunit 2.
 0.975
LFE_1668
Hypothetical protein.
  
 
 0.973
LFE_1738
ThiS family protein.
 
 0.951
thiS
Putative thiamine biosynthesis protein.
  
 
 0.917
LFE_0474
Hypothetical protein.
  
 
 0.834
LFE_1735
Hypothetical protein.
 
 
 0.822
LFE_1737
Hypothetical protein.
       0.806
LFE_1739
Threonine synthase.
       0.806
LFE_0249
Putative rhodanese-like domain protein.
    
 0.766
thiC
Thiamine biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
 
  
 0.722
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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