STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFE_2290Putative ImpA domain protein. (514 aa)    
Predicted Functional Partners:
LFE_2278
Hypothetical protein.
 
  
 0.973
LFE_2287
Hypothetical protein.
 
  
 0.941
LFE_2289
Hypothetical protein.
 
  
 0.940
LFE_2288
Hypothetical protein.
 
  
 0.935
LFE_2273
Hypothetical protein.
 
  
 0.922
LFE_2274
Hypothetical protein.
 
  
 0.910
LFE_2285
Hypothetical protein.
 
   
 0.904
LFE_2280
Putative Rhs element Vgr protein.
 
  
 0.903
LFE_2282
Putative pentapeptide repeat protein.
 
    0.894
LFE_2277
Hypothetical protein.
 
  
 0.892
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.