STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFE_2433Hypothetical protein. (393 aa)    
Predicted Functional Partners:
LFE_2431
Hypothetical protein.
 
  
 0.971
hoxZ
Putative Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
  
 0.957
hupD
Putative hydrogenase maturation protein.
 
  
 0.954
LFE_2428
Ferredoxin hydrogenase, large chain; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.953
LFE_2432
Putative hydrogenase-1 operon protein HyaF2.
 
    0.953
hydA
Ni-Fe hydrogenase small subunit.
 
   
 0.945
LFE_1105
Putative ferredoxin.
   
 
 0.923
LFE_0516
Putative NADH dehydrogenase (quinone) subunit F.
   
 
 0.918
LFE_1695
NADH dehydrogenase, subunit F.
  
 
 0.861
LFE_1066
NADH dehydrogenase, subunit F.
   
 
 0.857
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.