STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOPH_01544Putative formate dehydrogenase. (630 aa)    
Predicted Functional Partners:
TOPH_07372
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
     
 0.938
TOPH_04596
Oxalate decarboxylase OxdD.
    
  0.888
TOPH_08637
Formyltetrahydrofolate deformylase.
    
  0.884
TOPH_01765
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites.
   
 
  0.883
TOPH_01343
Tryptophan synthase.
    
  0.874
TOPH_08282
Malate dehydrogenase.
  
 0.851
TOPH_03700
Malate dehydrogenase.
  
 0.851
TOPH_07122
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.844
TOPH_07986
Malate synthase; Belongs to the malate synthase family.
   
 
 0.826
TOPH_04226
Malic enzyme.
     
 0.812
Your Current Organism:
Tolypocladium ophioglossoides
NCBI taxonomy Id: 1163406
Other names: Elaphocordyceps ophioglossoides CBS 100239, Elaphocordyceps ophioglossoides CBS100239, T. ophioglossoides CBS 100239, Tolypocladium ophioglossoides CBS 100239
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