STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH42461.1Na+ symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (496 aa)    
Predicted Functional Partners:
AFH42462.1
Hypothetical protein.
     
 0.805
AFH42130.1
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.727
AFH43067.1
Carbon starvation protein CstA.
  
    0.675
AFH42460.1
Amidohydrolase.
  
    0.652
AFH42463.1
Subtilisin; Endopeptidase, family S8A; Belongs to the peptidase S8 family.
  
  
 0.528
AFH42410.1
Putative Fe-S oxidoreductase.
 
  
 0.504
AFH42180.1
Gamma-glutamyltransferase.
  
  
 0.480
AFH42459.1
Metalloexopeptidase, family M42; Glutamyl metalloaminopeptidase.
       0.465
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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