STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378025_03272Unannotated protein. (741 aa)    
Predicted Functional Partners:
GCA_000378025_03270
Unannotated protein.
  
  0.995
GCA_000378025_03271
Unannotated protein.
 0.982
GCA_000378025_01341
Unannotated protein.
 0.927
GCA_000378025_01347
Unannotated protein.
 0.926
GCA_000378025_04084
Unannotated protein.
 0.875
GCA_000378025_02665
Unannotated protein.
 0.861
GCA_000378025_00830
Unannotated protein.
  
  0.702
GCA_000378025_02648
Unannotated protein.
 
  0.672
GCA_000378025_01343
Unannotated protein.
 
 
  0.668
GCA_000378025_02428
Unannotated protein.
 
  0.591
Your Current Organism:
Xanthobacteraceae bacterium 501b
NCBI taxonomy Id: 1168059
Other names: X. bacterium 501b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.