STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_03421zf-GRF domain-containing protein. (346 aa)    
Predicted Functional Partners:
W97_02831
Uncharacterized protein.
   
 0.952
W97_06657
RRM domain-containing protein.
    
 0.942
W97_06538
RRM domain-containing protein.
    
 0.887
W97_01378
Uncharacterized protein.
    
 0.865
W97_07610
Uncharacterized protein.
    
 0.865
W97_05237
Uncharacterized protein.
    
 0.849
W97_05858
Uncharacterized protein.
    
 0.818
W97_06239
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.816
W97_03870
Nuclear cap-binding protein subunit 2.
    
 0.812
W97_08430
Tr-type G domain-containing protein.
    
 0.810
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.