STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_062543,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (242 aa)    
Predicted Functional Partners:
W97_03828
Riboflavin synthase, alpha subunit.
 0.994
W97_04236
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.960
W97_08327
GTP_cyclohydro2 domain-containing protein.
 
   
 0.959
W97_06266
Uncharacterized protein.
 
      0.881
W97_03586
Coronin; Belongs to the WD repeat coronin family.
  
 0.797
W97_07641
PH domain-containing protein.
  
 0.797
W97_08770
Riboflavin biosynthesis protein RibD domain-containing protein.
 
  
 0.720
W97_09077
CMP/dCMP-type deaminase domain-containing protein.
  
 0.710
W97_07321
Flavokinase domain-containing protein.
    
 0.693
W97_02186
Nucleoside diphosphate kinase.
  
 0.677
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.