STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383275_00040Unannotated protein. (326 aa)    
Predicted Functional Partners:
GCA_000383275_00041
Unannotated protein.
 
    
0.836
GCA_000383275_00042
Unannotated protein.
       0.773
GCA_000383275_06051
Unannotated protein.
  
     0.746
BX591_1233
Unannotated protein.
  
     0.726
GCA_000383275_03420
Unannotated protein.
  
 
   0.724
GCA_000383275_01101
Unannotated protein.
  
     0.710
BX591_102491
Unannotated protein.
  
     0.710
GCA_000383275_05863
Unannotated protein.
  
     0.708
GCA_000383275_02910
Unannotated protein.
  
     0.638
BX591_11374
Unannotated protein.
    
  0.630
Your Current Organism:
Paraburkholderia bryophila
NCBI taxonomy Id: 1169143
Other names: Burkholderia bryophila 376MFSha3.1, P. bryophila 376MFSha3.1, Paraburkholderia bryophila 376MFSha3.1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.