STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV87941.1Oxidoreductase, zinc-binding dehydrogenase family protein. (352 aa)    
Predicted Functional Partners:
AFV88318.1
Phosphotransferase system.
  
 
 0.909
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.905
AFV91061.1
PfkB domain-containing protein.
  
 
 0.902
AFV90916.1
Levanase; Belongs to the glycosyl hydrolase 32 family.
     
 0.901
AFV87942.1
PTS system, Lactose/Cellobiose specific IIB subunit.
 
    0.819
AFV87943.1
PTS system, galactitol-specific IIC component.
    0.779
AFV87944.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system.
 
    0.582
AFV87940.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system.
  
    0.515
AFV90823.1
Alcohol dehydrogenase zinc-binding domain-containing protein.
 
    0.444
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.420
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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