STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mviNIntegral membrane protein MviN. (646 aa)    
Predicted Functional Partners:
AFV88414.1
FHA domain-containing protein.
    
 
 0.967
holA
DNA polymerase III, delta subunit.
  
  
 0.710
AFV87861.1
Hypothetical protein; DUF721.
      
 0.682
AFV88460.1
Aspartate kinase, monofunctional; Belongs to the aspartokinase family.
       0.618
AFV88422.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
     
 0.593
AFV90977.1
S51 family peptidase.
  
   
 0.578
AFV89143.1
SecG multi-domain protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.552
AFV88411.1
Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
 
  
 0.541
AFV89471.1
FHA domain-containing protein.
  
 
 
 0.528
AFV89448.1
3'-5' exonuclease.
 
    0.521
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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