STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS32699.1Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. (239 aa)    
Predicted Functional Partners:
SDS76534.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family; Manually curated.
  
     0.774
SDS53076.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.726
SDS32669.1
Hypothetical protein.
 
     0.692
SDS32636.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
 
  
  0.629
SDR68904.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
 
0.581
SDS20121.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
  
 
 0.539
SDS26583.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 
0.517
SDS54592.1
Hyaluronan synthase.
 
 
  0.515
SDS52977.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
  0.451
SDR92738.1
Glycosyl transferase family group 2.
   
 
  0.447
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.