STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY95151.1PFAM: Uncharacterized integral membrane protein (DUF2301). (221 aa)    
Predicted Functional Partners:
AFY96108.1
Hypothetical protein.
  
     0.768
AFY94678.1
PFAM: Protein of unknown function (DUF3067).
  
     0.760
AFY94914.1
Hypothetical protein; Manually curated.
  
     0.753
AFY93424.1
Hypothetical protein.
  
     0.744
AFY95112.1
PFAM: Uncharacterized conserved protein (DUF2358).
  
     0.739
AFY96313.1
Hypothetical protein.
  
     0.736
thf1
Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis.
  
     0.731
AFY96233.1
PFAM: Protein of unknown function (DUF3353).
  
     0.723
AFY94211.1
PFAM: Fatty acid desaturase.
  
     0.722
AFY91765.1
PFAM: Protein of unknown function (DUF3007).
  
     0.713
Your Current Organism:
Chamaesiphon minutus
NCBI taxonomy Id: 1173020
Other names: C. minutus PCC 6605, Chamaesiphon minutus PCC 6605, Chamaesiphon sp. ACMM 446, Chamaesiphon sp. ATCC 27169, Chamaesiphon sp. PCC 6605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.