STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ11260.1KEGG: syp:SYNPCC7002_G0041 hypothetical protein; SPTR: Putative uncharacterized protein. (472 aa)    
Predicted Functional Partners:
AFZ11259.1
PFAM: Plasmid pRiA4b ORF-3-like protein; InterPro IPR012912; KEGG: syp:SYNPCC7002_G0040 hypothetical protein; PFAM: Plasmid pRiA4b ORF-3-like; SPTR: Putative uncharacterized protein.
       0.773
AFZ12983.1
KEGG: cyn:Cyan7425_4094 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.537
AFZ11261.1
PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gca:Galf_1465 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase family protein.
       0.496
Your Current Organism:
Crinalium epipsammum
NCBI taxonomy Id: 1173022
Other names: C. epipsammum PCC 9333, Crinalium epipsammum PCC 9333, Crinalium sp. PCC 9333
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.